PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177577.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 190aa    MW: 21322.7 Da    PI: 4.9857
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.6e-1857107255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f taeeAa a+++a+++ +g
  XP_027177577.1  57 HYIGVRKRP-WGKYAAEIRDSTRNG--MRVWLGTFATAEEAALAYDQAALSVRG 107
                     799******.**********44465..***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MESSWMEDED QDFCNTIDGV FKSSWETSCS SSKNNSGECS IFFTTSIQQE PAEKEKHYIG  60
VRKRPWGKYA AEIRDSTRNG MRVWLGTFAT AEEAALAYDQ AALSVRGPTT ALNFPIEKVQ  120
ESLRNMVICS YQDGSSPVEA LKEAHRMKST ASKRRGKGKQ VKQEDVLVFE DLGSDLLDEL  180
LSETNNSRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-32ERF family protein