PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177522.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 286aa    MW: 32757.3 Da    PI: 4.9062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.8e-202978255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  XP_027177522.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                    69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDGYRKTTLK PWKKGPARGK GGPQNAMCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPD AYVNLPHLRS NFNPLNKSQK FKWFPSNSLV SMFPSTGLLN  120
LNAQPSVHVI HQRLQELKET GLLCQTSSAS TSSSNPKSDV EYVDDHPHVE SLEGKNNDEV  180
EHPWENKSLN QEEKPQIDLN EFLQQLGILK KEDQPDVSEV PSNFIDKDFS PKDDDVFTNL  240
PENIFNWETP SELPGIEDNQ LVENSRFHVD NDNDDDPSFP PSIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.16e-78ERF family protein