PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027177263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 19466.5 Da PI: 9.3141 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4e-19 | 24 | 74 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +ykGVr +k +g+WvAe+r p++ r r++lg++ ta+eAa+a++aa+ +l+g+ XP_027177263.1 24 RYKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYQTAQEAARAYDAAAFCLRGP 74 7******99.*******999854...4*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MVRPQSRREN GGTSRSNGIN NSRRYKGVRM RKWGKWVAEV RQPKSRDRIW LGSYQTAQEA 60 ARAYDAAAFC LRGPSVMLNF PDDPPRIPAA GELSATQIQV AASRHARSRR VEEDALVDGN 120 EEVGVEGGFL QECSDFGGFL RNGFCERGGE RDDSGGGGGG GGSAGMSSAT FFGTPALWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 3e-26 | ERF family protein |