PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027177225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 412aa MW: 44783 Da PI: 5.7074 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.5 | 1.8e-25 | 208 | 263 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+++Hnh+ XP_027177225.1 208 DGYNWRKYGQKQVKSPQGSRSYYRCTYSECCAKK-IECSDDSNRVMEIVYRSHHNHD 263 9*******************************98.*********************7 PP | |||||||
2 | WRKY | 35 | 2.8e-11 | 380 | 400 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 Dgy+WrKYGqK+vkg+++pr XP_027177225.1 380 ADGYRWRKYGQKMVKGNPHPR 400 6*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MDAKNFNSDN NSSNKSPSCE GEDEAAAQNS KSREEFDENS RGGGGGDGYE QVNSKTVDNS 60 SIPVVVAQMS NNRASSTPET LATAASSDLH CKFEVAVDNE MQRLEPAEEL KDQVGMSYQE 120 EFRIIADQAV PDQTQNQQEP PNGPRSSEPS PTSVTQPISS VPSPTLPEQK MSPGDNRNTS 180 HTSEADKKNS FDPKTLSVVS IQKTPSPDGY NWRKYGQKQV KSPQGSRSYY RCTYSECCAK 240 KIECSDDSNR VMEIVYRSHH NHDPPQKVNC TRGSRHSLSI APANGSDSSV APIGATADSA 300 PSTSSKDSVQ ETVSVPDPIQ KDSSDSDDNA ETNIKQERED EPEPSKRLKK TVASCSAPLL 360 KPGKKPKIVV HAASDVGISA DGYRWRKYGQ KMVKGNPHPR PTCLLVGFIS NQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-66 | WRKY family protein |