PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177224.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 514aa    MW: 55597.3 Da    PI: 6.6429
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.12.4e-25208263359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+++Hnh+
  XP_027177224.1 208 DGYNWRKYGQKQVKSPQGSRSYYRCTYSECCAKK-IECSDDSNRVMEIVYRSHHNHD 263
                     9*******************************98.*********************7 PP

2WRKY79.44e-25380433259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      Dgy+WrKYGqK+vkg+++pr    CtsagCpv+k++er+++++++v+itY+g H+h+
  XP_027177224.1 380 ADGYRWRKYGQKMVKGNPHPR----CTSAGCPVRKHIERAKDNTNAVIITYKGVHDHD 433
                     6*******************6....********************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MDAKNFNSDN NSSNKSPSCE GEDEAAAQNS KSREEFDENS RGGGGGDGYE QVNSKTVDNS  60
SIPVVVAQMS NNRASSTPET LATAASSDLH CKFEVAVDNE MQRLEPAEEL KDQVGMSYQE  120
EFRIIADQAV PDQTQNQQEP PNGPRSSEPS PTSVTQPISS VPSPTLPEQK MSPGDNRNTS  180
HTSEADKKNS FDPKTLSVVS IQKTPSPDGY NWRKYGQKQV KSPQGSRSYY RCTYSECCAK  240
KIECSDDSNR VMEIVYRSHH NHDPPQKVNC TRGSRHSLSI APANGSDSSV APIGATADSA  300
PSTSSKDSVQ ETVSVPDPIQ KDSSDSDDNA ETNIKQERED EPEPSKRLKK TVASCSAPLL  360
KPGKKPKIVV HAASDVGISA DGYRWRKYGQ KMVKGNPHPR CTSAGCPVRK HIERAKDNTN  420
AVIITYKGVH DHDMPVPKKR HGPPSAPLVA AAAPASMSTV QVVKSETIQN QVSATQWSVD  480
KEGGLKGQTL ECGGEKNVES ARTLLSIGFE IKPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-108WRKY family protein