PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027177223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 518aa MW: 56193.9 Da PI: 6.7796 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.1 | 2.4e-25 | 208 | 263 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+++Hnh+ XP_027177223.1 208 DGYNWRKYGQKQVKSPQGSRSYYRCTYSECCAKK-IECSDDSNRVMEIVYRSHHNHD 263 9*******************************98.*********************7 PP | |||||||
2 | WRKY | 100.5 | 1e-31 | 380 | 437 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+++++++v+itY+g H+h+ XP_027177223.1 380 ADGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAKDNTNAVIITYKGVHDHD 437 6********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 518 aa Download sequence |
MDAKNFNSDN NSSNKSPSCE GEDEAAAQNS KSREEFDENS RGGGGGDGYE QVNSKTVDNS 60 SIPVVVAQMS NNRASSTPET LATAASSDLH CKFEVAVDNE MQRLEPAEEL KDQVGMSYQE 120 EFRIIADQAV PDQTQNQQEP PNGPRSSEPS PTSVTQPISS VPSPTLPEQK MSPGDNRNTS 180 HTSEADKKNS FDPKTLSVVS IQKTPSPDGY NWRKYGQKQV KSPQGSRSYY RCTYSECCAK 240 KIECSDDSNR VMEIVYRSHH NHDPPQKVNC TRGSRHSLSI APANGSDSSV APIGATADSA 300 PSTSSKDSVQ ETVSVPDPIQ KDSSDSDDNA ETNIKQERED EPEPSKRLKK TVASCSAPLL 360 KPGKKPKIVV HAASDVGISA DGYRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIERAK 420 DNTNAVIITY KGVHDHDMPV PKKRHGPPSA PLVAAAAPAS MSTVQVVKSE TIQNQVSATQ 480 WSVDKEGGLK GQTLECGGEK NVESARTLLS IGFEIKPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-114 | WRKY family protein |