PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177161.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 397aa MW: 44563.8 Da PI: 6.7346

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.5	2.1e-56	3	130	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL+kkv +k++ + +i+evd++k+ePwdLpkk+k +eke +fF++rd+ky+tg r+nrat sgyWkatgkdke+++ XP_027177161.1 3 LPPGFRFHPTDEEIITHYLTKKVVDKNFGA-IAIAEVDMNKCEPWDLPKKAKMGEKEHFFFCQRDRKYPTGMRTNRATGSGYWKATGKDKEIYKG 96 79***********************999.88***********99999*************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg lvg+kktLvfy+grapkgekt+Wvmheyrle XP_027177161.1 97 KGCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 130 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MDLPPGFRFH PTDEEIITHY LTKKVVDKNF GAIAIAEVDM NKCEPWDLPK KAKMGEKEHF 60 FFCQRDRKYP TGMRTNRATG SGYWKATGKD KEIYKGKGCL VGMKKTLVFY RGRAPKGEKT 120 NWVMHEYRLE GRFSYYNFPK GAKDEWVVCR VFHKNVGIRR SPLRDLTRAD SFLDHLLDSP 180 SSLPPLMDIP NSSNRPGISS FSHEEDQEFK GATTSSGKSS DHGTLPSYFS TNLNNSTLQM 240 QQDLNTFLMP SYNYAFKTSY EAGSSNHDPS SFFCPPISVP AANFHGYQNE SYSSFSGFKA 300 TPDHQANSST LSAPNQQGIS DPGKQCKMEQ FSSTNSMVSP SQDTGISNDM APEISSVVSK 360 INVESDKCMK DLEGISVDPN MSDLDSLWNI TDFTTEE

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MDLPPGFRFH PTDEEIITHY LTKKVVDKNF GAIAIAEVDM NKCEPWDLPK KAKMGEKEHF  60
FFCQRDRKYP TGMRTNRATG SGYWKATGKD KEIYKGKGCL VGMKKTLVFY RGRAPKGEKT  120
NWVMHEYRLE GRFSYYNFPK GAKDEWVVCR VFHKNVGIRR SPLRDLTRAD SFLDHLLDSP  180
SSLPPLMDIP NSSNRPGISS FSHEEDQEFK GATTSSGKSS DHGTLPSYFS TNLNNSTLQM  240
QQDLNTFLMP SYNYAFKTSY EAGSSNHDPS SFFCPPISVP AANFHGYQNE SYSSFSGFKA  300
TPDHQANSST LSAPNQQGIS DPGKQCKMEQ FSSTNSMVSP SQDTGISNDM APEISSVVSK  360
INVESDKCMK DLEGISVDPN MSDLDSLWNI TDFTTEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-102	NAC family protein