PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027177056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24045.9 Da PI: 4.621 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.8e-17 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g++v+eIr p++ r r++lg+++tae+Aa+a +aa +l+g XP_027177056.1 35 KYTGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 84 89****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MVKPAAQKRS SSPPSTAATL ERFKVAGDHS SSSIKYTGVR KRKWGKYVSE IRLPNSRERI 60 WLGSYDTAEK AARAFDAALF CLRGKLAKFN FPDNPPEIVN GRSMTPAEIQ VAAAQFANSE 120 HRLIGEPARI DNLVSDNSSS SISSLELQAE SPCPSVSDGV VQLESELPEI PLDNAFLDMF 180 GIFPGFDDFF VPPMPTVDLD GEENFEGYFS QDSTLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-51 | ERF family protein |