PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027176813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 304aa MW: 32805.8 Da PI: 8.0976 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.00031 | 125 | 147 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_027176813.1 125 YQCKTCNRSFPSFQALGGHRASH 147 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 13.7 | 0.00018 | 206 | 228 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_027176813.1 206 HECSICGAEFSSGQALGGHMRRH 228 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MEVHQEEIIL GSKHMIFKGK RTKRQRTVPQ PPFLLTMATT TSSSCSTGTP GGDSFTAFNR 60 VTTSPSNSGE LTQTSVVGVD QEEDMANCLI LLAQGRARKS TQPTTHPPMP STSTAKSSSA 120 VHDVYQCKTC NRSFPSFQAL GGHRASHKKP KPTDLEGKSP PPLSLGAHQE STVGLIRDED 180 TTLSLQIPSG RKDPIIAGDV NKSRVHECSI CGAEFSSGQA LGGHMRRHRP LPTLTGTSSN 240 DEEGSREFAV KKPRALLSLD LNLPAAPDQP EDDYSTESKY PFASAKQQVI VFSASPHPLV 300 DCHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03510.1 | 2e-51 | C2H2 family protein |