PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027176637.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Trihelix

Protein Properties

Length: 283aa MW: 32805.8 Da PI: 8.1045

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027176637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.7	1e-25	33	115	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r e++ ++ ++k++k lWe ++ kmre+g++rs++qCk+kw+nl +ryk ++++e ++ +++++p++++l+ XP_027176637.1 33 QWSIQETRDFLMIRAELDPTFMETKRNKLLWEVIATKMREKGYNRSAEQCKCKWKNLVTRYKGCETMEPEG---VRQQFPFYNDLQ 115 7******************************************************************96...77889**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MESHQHHHHH QYGSSSSVHI DTGGGGGGDR FPQWSIQETR DFLMIRAELD PTFMETKRNK 60 LLWEVIATKM REKGYNRSAE QCKCKWKNLV TRYKGCETME PEGVRQQFPF YNDLQTIFAA 120 RMQRMLWMEA EGGAGSSKKK AAQLSSDDED DNDDSEVERA HKKKRKLKAG GGGGGGGASS 180 ASASAAAGGN VVNSLKEILD EFMKQQMQIE MQWMKAYEAR EEERRKRETE WRQTMEALEN 240 ERLMMDKRWR EREEQRRIRE EARAENRDAL ITALLNKLQR EDR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	167	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	4e-61	Trihelix family protein