PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027175984.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 637aa MW: 68961.4 Da PI: 7.9616

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027175984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.8	1.2e-14	153	192	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ XP_027175984.1 153 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCFNNVEN 192 89************************.******9875 PP
2	TCR	50.8	3.4e-16	237	276	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_027175984.1 237 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 276 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MEQSEGGDFP PKNAQSETTG QQQLPPQVGT DIPAKKLARQ LDFTGYTGVS SAAASSATST 60 AALREHTQQT QPPQVAVRPS LPQPQLQQPV PRPTQPPKSQ LQPQPQPPIP LMSMQQPPVP 120 PAVHPQMRPM KPESPRPRPR SNAGDAKDGT PKKQKQCNCK HSRCLKLYCE CFASGIYCDG 180 CNCVNCFNNV ENEAARREAV ENTLERNPNA FRPKIASSPH GIRDSREEPG EGLVIGKHNK 240 GCHCKKSGCL KKYCECFQAN ILCSENCKCM DCKNFEGSEE RQALFHGDHA NNIAYIQQAA 300 NAAITGAIGS SGYGSPPVNK KRKGQELFFA STVKDPLNRL GQFQQANHMK TTVPSSTLSS 360 IPGARLGNPA GMGPSKFTYR SLLADIIQPQ DLKELCSVLV VYSAEAAKML ADERNATERS 420 SQEHRESHLA STQDQSQNQK DLSVAEKARL ADSFDGNSSE KIGPDESVSD GADVSKSRPM 480 SPGTLALMCD EQDAMFTTAA SPSDLTGQSN MSCQLPHGQG LTEAYAEQER IVLTKFRDCL 540 NKLVTLGEIK ETKCSSFARS ESSNHRDLVS NGSASVRNET WNQHEPLSNG IPKSTIPPPP 600 RTPQIVTSAG TATSDLLPKI PSSVENGDVK PKPEKAL

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MEQSEGGDFP PKNAQSETTG QQQLPPQVGT DIPAKKLARQ LDFTGYTGVS SAAASSATST  60
AALREHTQQT QPPQVAVRPS LPQPQLQQPV PRPTQPPKSQ LQPQPQPPIP LMSMQQPPVP  120
PAVHPQMRPM KPESPRPRPR SNAGDAKDGT PKKQKQCNCK HSRCLKLYCE CFASGIYCDG  180
CNCVNCFNNV ENEAARREAV ENTLERNPNA FRPKIASSPH GIRDSREEPG EGLVIGKHNK  240
GCHCKKSGCL KKYCECFQAN ILCSENCKCM DCKNFEGSEE RQALFHGDHA NNIAYIQQAA  300
NAAITGAIGS SGYGSPPVNK KRKGQELFFA STVKDPLNRL GQFQQANHMK TTVPSSTLSS  360
IPGARLGNPA GMGPSKFTYR SLLADIIQPQ DLKELCSVLV VYSAEAAKML ADERNATERS  420
SQEHRESHLA STQDQSQNQK DLSVAEKARL ADSFDGNSSE KIGPDESVSD GADVSKSRPM  480
SPGTLALMCD EQDAMFTTAA SPSDLTGQSN MSCQLPHGQG LTEAYAEQER IVLTKFRDCL  540
NKLVTLGEIK ETKCSSFARS ESSNHRDLVS NGSASVRNET WNQHEPLSNG IPKSTIPPPP  600
RTPQIVTSAG TATSDLLPKI PSSVENGDVK PKPEKAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-160	CPP family protein