PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027175831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 287aa MW: 31787 Da PI: 8.5861 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.8 | 8.5e-05 | 225 | 247 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+ +Fs+ ++L++H + H XP_027175831.1 225 QCPQCNLRFSSVMDLVNHVERvH 247 7*****************99888 PP | |||||||
2 | zf-C2H2 | 17.7 | 9.9e-06 | 259 | 281 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ +L+ H + H XP_027175831.1 259 VCPKCSKGFRDPVSLVEHVEReH 281 7*****************99888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MGTPAFPNLG KHCSVEDCRQ IDFLPFTCDS CHQVFCLEHR SYGRHHCPKA NKNDVTVVVC 60 PLCAKGVRLI PDENPNITWE SHVNIECDPS NYDKVTKKRK CPVSGCREIL SFSNKIRCKD 120 CTIEHCLKHR FGPDHRCPGP KKIQSTFQFS SFLSSGKQQS KQNPVSSSSS WASSLFRVAS 180 SVRATAESGV ARLSSDFKDI LQGSGSSSGS SSTSHGGSTS RQLEQCPQCN LRFSSVMDLV 240 NHVERVHERN GVMKVTLDVC PKCSKGFRDP VSLVEHVERE HRGTSKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41835.1 | 1e-110 | C2H2 family protein |