PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027175580.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 565aa MW: 61873.9 Da PI: 7.2016

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027175580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.9	2.1e-33	232	289	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_027175580.1 232 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGNHNHPK 289 7**************************************.*************85 PP
2	WRKY	105.6	2.7e-33	404	462	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_027175580.1 404 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 462 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MAASTGTLDT ANFSFSPTSF MSTTSFTDLL ASDGYSMATS TGMAAESRGL GDRIAERTGS 60 GVPKFKSLPP PSLPISPPPV SPSSYFAIPP GLSPTELLDS PVLLSGSSVL PSPTTGSFPF 120 QAFNWKSNSY NSQQGIKQEQ KNYQDFSFQP QAAVSRPQTN TIPEGQMQQP WNYQEPAKQD 180 DPTVKSDVTS MQSFSPEIGN IQANSQGNGG FQSEYNNYNQ SSQTLSERRR SEDGYNWRKY 240 GQKQVKGSEN PRSYYKCTYP NCPTKKKVER SLDGQITEIV YKGNHNHPKP QSTRRSSASS 300 TACSVVIQPY SSQSNDVPDQ SYASTGNGQM DSVATPENSS ISIGDDDFEQ SSKSKSGGDE 360 FDDDEPDAKR WKTESESEGI SAPGSRTVRE PRVVVQTTSD IDILDDGYRW RKYGQKVVKG 420 NPNPRSYYKC TNPGCPVRKH VERASHDLRA VITTYEGKHN HDVPAARGSG SNSANRPVPS 480 SNAHMAVRPS VMSHQSNYPI PVRSFRAPPP EGQQAPYTLK MLQDPAGNYG FGNSMGSYLN 540 VPQANTFSRA KDEPRDDMFL ESLLC

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MAASTGTLDT ANFSFSPTSF MSTTSFTDLL ASDGYSMATS TGMAAESRGL GDRIAERTGS  60
GVPKFKSLPP PSLPISPPPV SPSSYFAIPP GLSPTELLDS PVLLSGSSVL PSPTTGSFPF  120
QAFNWKSNSY NSQQGIKQEQ KNYQDFSFQP QAAVSRPQTN TIPEGQMQQP WNYQEPAKQD  180
DPTVKSDVTS MQSFSPEIGN IQANSQGNGG FQSEYNNYNQ SSQTLSERRR SEDGYNWRKY  240
GQKQVKGSEN PRSYYKCTYP NCPTKKKVER SLDGQITEIV YKGNHNHPKP QSTRRSSASS  300
TACSVVIQPY SSQSNDVPDQ SYASTGNGQM DSVATPENSS ISIGDDDFEQ SSKSKSGGDE  360
FDDDEPDAKR WKTESESEGI SAPGSRTVRE PRVVVQTTSD IDILDDGYRW RKYGQKVVKG  420
NPNPRSYYKC TNPGCPVRKH VERASHDLRA VITTYEGKHN HDVPAARGSG SNSANRPVPS  480
SNAHMAVRPS VMSHQSNYPI PVRSFRAPPP EGQQAPYTLK MLQDPAGNYG FGNSMGSYLN  540
VPQANTFSRA KDEPRDDMFL ESLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-120	WRKY family protein