PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027175180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 361aa MW: 40146.8 Da PI: 10.3289 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.3 | 0.001 | 51 | 73 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F++ L H +H XP_027175180.1 51 FECKTCNKKFPTFQALGGHRASH 73 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 11 | 0.0014 | 96 | 118 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F+ L H+r+H XP_027175180.1 96 HECPFCGLEFPLGQALGGHMRRH 118 78********************9 PP | |||||||
3 | zf-C2H2 | 11.4 | 0.001 | 241 | 263 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k Fs+ L H +H XP_027175180.1 241 FTCKTCNKQFSSFQALGGHRASH 263 89**********99999998887 PP | |||||||
4 | zf-C2H2 | 10.7 | 0.0016 | 287 | 309 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F+ L H+r+H XP_027175180.1 287 HECSICGLEFPLGQALGGHMRRH 309 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MTVKRSREEA PAAETVEETA AINLLMLLSR VGEATTSAAA DQAATPSGRV FECKTCNKKF 60 PTFQALGGHR ASHKKLKLMA ELLTQPSNSP RKPKKHECPF CGLEFPLGQA LGGHMRRHRA 120 AMLEGRREID ESHGRKVAVP VLKRSNSSKR VFGLDLNLSP FENDLRQLMK APLRFENSQI 180 QKERFVNGTP IADRNTTLLY MTVKRSREDR EVEAFAMANC LMLLSNMAKT TSSPPSLDRV 240 FTCKTCNKQF SSFQALGGHR ASHKRTRLVA ADGLHDQNHS PAKPKTHECS ICGLEFPLGQ 300 ALGGHMRRHR NDGTAGDKSE ETQSGSQKSN SHSDSHRALL LDLNLTPREN EFKFGRLDSF 360 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 4e-34 | C2H2 family protein |