PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174956.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 213aa    MW: 23243.8 Da    PI: 7.2149
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.3e-054062123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C+k Fs+   L  H++ H
  XP_027174956.1 40 YECNFCKKGFSNAQALGGHMNIH 62
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
METNQQPTSE IPSPRGQAGV GDSSDHEQQA RSPTSQSRLY ECNFCKKGFS NAQALGGHMN  60
IHRKDKAKLK QASKENQRLI DAQGMPNNPL TPSSTSPGNN IGKPLEFTSS AQVLMKISSP  120
KWHSSALAPD HLRENYSYES HMAELKQLPL FVETASSVAV AEYSGPVIQA NSGSWQEEFI  180
SGQGSFGAEL DLELRLGHEP PKSTVVTGTR KFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-17C2H2 family protein