PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174639.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Nin-like

Protein Properties

Length: 851aa MW: 95066.9 Da PI: 4.8994

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	58.5	1.3e-18	691	738	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e+l+++ ++dAAk Lgv+ ++LKriCR+yGI+RWP Rk +++ XP_027174639.1 691 ITREVLEQNSTRRLEDAAKVLGVSRSTLKRICREYGINRWPPRKARKV 738 899*****************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
MEAQTSSSPA FPTAGLGPCE LSYSHSTKDP HYHSHQWVFW STFCNDKVHC VKPRVAAAAG 60 GAVIKDQIKR FLELVKQIIW CRCRLVQFWG LVKIDDKMYL TTCDQPFAFQ CSSPLDVKKV 120 CEHRKHCLDY LIPVDDDDDG ELIIGPPGRV FRSGFPEYAR NVGDYTSREY PQRDFAAERF 180 RDYWALPVYH HPTQDLPSGV LEIVASSYVF SVSGHWVLEK LQNLLREVNL TTTRVSVAEV 240 NSGHQEEEIA ILYIVSIVVS TIHKLPHREI WSASGEMLSS CDGDFIQKGQ GVVGKAFSSK 300 SACFCRDIRQ LSITEYPLVP IARRLKYSAC FAVCLQSYCS NNCIYVLEFF LPTYEEDEDE 360 DEDEADYGED EDEAGYEEDE ADYGDPRTLL NSLMETLKER LGSSFKIASG QELGQKLTVE 420 VIKVSPEDKF DSFEICNTTR SESTPGLVEV QEGAGMAQLD CSSQQVDAAN GSMDGIHNQQ 480 NRSVGSTRRR RNGSVGSPED EFDSFDISSP AGIESQPRLE EVQGGDGMMQ LDFSSQQVDA 540 ANGSMDGIHN QQHGSVGSTP RNAKAQGEGM VQVDNANGHI NGVHAQQSGI VGSPPRPEHV 600 QGIVNISDQE LNLAGVDVVH NSTDGVYEQK NGIDRSSTGQ EVVQNMVSIA HDEPIVEDPR 660 RDGASIEQRD NEVTNLEVQK PSWTLKSDLG ITREVLEQNS TRRLEDAAKV LGVSRSTLKR 720 ICREYGINRW PPRKARKVSQ AFAVQKTVQP STEDTHEHHQ SNARAKAKYQ GRMIKFRLPF 780 SASKINLEEN VAQRLNLAMG SFIIEYQDED DDRIWITCDG DLRTSMSTLS SLGRTTIKMY 840 IVKDSPNRRD Q

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

MEAQTSSSPA FPTAGLGPCE LSYSHSTKDP HYHSHQWVFW STFCNDKVHC VKPRVAAAAG  60
GAVIKDQIKR FLELVKQIIW CRCRLVQFWG LVKIDDKMYL TTCDQPFAFQ CSSPLDVKKV  120
CEHRKHCLDY LIPVDDDDDG ELIIGPPGRV FRSGFPEYAR NVGDYTSREY PQRDFAAERF  180
RDYWALPVYH HPTQDLPSGV LEIVASSYVF SVSGHWVLEK LQNLLREVNL TTTRVSVAEV  240
NSGHQEEEIA ILYIVSIVVS TIHKLPHREI WSASGEMLSS CDGDFIQKGQ GVVGKAFSSK  300
SACFCRDIRQ LSITEYPLVP IARRLKYSAC FAVCLQSYCS NNCIYVLEFF LPTYEEDEDE  360
DEDEADYGED EDEAGYEEDE ADYGDPRTLL NSLMETLKER LGSSFKIASG QELGQKLTVE  420
VIKVSPEDKF DSFEICNTTR SESTPGLVEV QEGAGMAQLD CSSQQVDAAN GSMDGIHNQQ  480
NRSVGSTRRR RNGSVGSPED EFDSFDISSP AGIESQPRLE EVQGGDGMMQ LDFSSQQVDA  540
ANGSMDGIHN QQHGSVGSTP RNAKAQGEGM VQVDNANGHI NGVHAQQSGI VGSPPRPEHV  600
QGIVNISDQE LNLAGVDVVH NSTDGVYEQK NGIDRSSTGQ EVVQNMVSIA HDEPIVEDPR  660
RDGASIEQRD NEVTNLEVQK PSWTLKSDLG ITREVLEQNS TRRLEDAAKV LGVSRSTLKR  720
ICREYGINRW PPRKARKVSQ AFAVQKTVQP STEDTHEHHQ SNARAKAKYQ GRMIKFRLPF  780
SASKINLEEN VAQRLNLAMG SFIIEYQDED DDRIWITCDG DLRTSMSTLS SLGRTTIKMY  840
IVKDSPNRRD Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-37	Nin-like family protein