PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174394.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 131aa    MW: 14542 Da    PI: 5.315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-191969255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +g+++AeIrd ++ng  +r +lg+f taeeAa+a+++a+ + +g
  XP_027174394.1 19 RYRGVRKRP-WGKYAAEIRDMNNNG--ARLWLGTFATAEEAARAYDRAAFATRG 69
                    6********.**********65555..**********************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MADQGGGNKS KDDKEGEVRY RGVRKRPWGK YAAEIRDMNN NGARLWLGTF ATAEEAARAY  60
DRAAFATRGS LAVLNFPEEY PSSSSLASTS SSSSSSHMNP NIGREVIEFE YLDDKVLEDL  120
LQVEENKTTK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-27ERF family protein