PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027174181.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29286.6 Da PI: 5.603 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 63.3 | 7.5e-20 | 22 | 93 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + wyfF+ +ky++g+r++r + g+Wk tgkdk+++ +g++vg +k+L f gekt W mheyr+ XP_027174181.1 22 NVNGWYFFTYLTNKYPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 93 4579*******************666799*************.999***********5...45678********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MRFGVRGFLI DAHRYRSDSL HNVNGWYFFT YLTNKYPKGS RPSRSCGDGG FWKPTGKDKK 60 IYYNGNTVGY RKSLDFLLGP GEKTAWKMHE YRIHANNPKS DPVLCRLYMN IRRKNKDESE 120 GDTVELMREN LDQCFTVNEA PMQNEDNDLA VGNISSAGST NNQCMEYITS TLDTGGDAIS 180 NQVIYDLSSF QFPDHPFQDF QGYTNSHGGL EAITQEFTEP FHLSRGTMIP SDLNMEDVSK 240 YAIGGTDLSD LAWQIMSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 6e-19 | NAC family protein |