PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174131.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 415aa MW: 46237.1 Da PI: 8.3998

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	309	363	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLH+rFve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR XP_027174131.1 309 KTRIRWTQELHDRFVECVNHLGGADKATPKAILRLMEWEGLTIFHVKSHLQKYRN 363 68****************************************************6 PP
2	Myb_DNA-binding	49.7	8.3e-16	313	362	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+e+++++v++v+ lGg t+k+I r m +g+t ++ks++qky+ XP_027174131.1 313 RWTQELHDRFVECVNHLGGAdkaTPKAILRLMEwEGLTIFHVKSHLQKYR 362 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MPSVLFATAY SSKEFVNKKD RFPTVISCNF GLDNFSGTHL LLLFLVQSFE LLHLTSIIII 60 PSMNIQKIGS YERMLQNCGH TSDYASEFSY RFPHSFGNPP ESSDMGLCFQ SAARDDGSQR 120 QNFWPNNSSS TIMGQIGSAS AFYAAEVYMG LTQLDARDNQ STCSTQLSKI NHDVHIPSYD 180 QSENCLFTDS PPRKLEPCSF PANNALPAVP NSQTPNSQYI SSEASYRHPF SDLTEKERLW 240 QLKKKLLGDV DNPNKRQHTM PLQRNQDVGV SCNLYDSHFP NAKPSGRSSG CISPISTNPA 300 SAAGAVTNKT RIRWTQELHD RFVECVNHLG GADKATPKAI LRLMEWEGLT IFHVKSHLQK 360 YRNAKYIPAS AEGTLLTNNF AQYVRKVVMF DPKIASGKSD KGPCTNNAAQ IDIKK

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MPSVLFATAY SSKEFVNKKD RFPTVISCNF GLDNFSGTHL LLLFLVQSFE LLHLTSIIII  60
PSMNIQKIGS YERMLQNCGH TSDYASEFSY RFPHSFGNPP ESSDMGLCFQ SAARDDGSQR  120
QNFWPNNSSS TIMGQIGSAS AFYAAEVYMG LTQLDARDNQ STCSTQLSKI NHDVHIPSYD  180
QSENCLFTDS PPRKLEPCSF PANNALPAVP NSQTPNSQYI SSEASYRHPF SDLTEKERLW  240
QLKKKLLGDV DNPNKRQHTM PLQRNQDVGV SCNLYDSHFP NAKPSGRSSG CISPISTNPA  300
SAAGAVTNKT RIRWTQELHD RFVECVNHLG GADKATPKAI LRLMEWEGLT IFHVKSHLQK  360
YRNAKYIPAS AEGTLLTNNF AQYVRKVVMF DPKIASGKSD KGPCTNNAAQ IDIKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	8e-33	G2-like family protein