PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174084.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 144aa    MW: 16574.6 Da    PI: 6.2588
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.72.5e-102675148
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...t 48
                    kfYn+YA ++GFs+rk++ +k  ++g +t+r++ C ke  + + + +   +
  XP_027174084.1 26 KFYNKYAFKMGFSIRKNYLNKD-KDGVTTSRRYSCHKESVKCKYEGDvseS 75
                    6*****************9998.8999***********9988777663330 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MNCSKLTEDR ILELGMEFNS EKDMYKFYNK YAFKMGFSIR KNYLNKDKDG VTTSRRYSCH  60
KESVKCKYEG DVSESEPTSI SFDEHMFMGC RSSIDSVSAE RATISTHCNK DAYNVFSPSP  120
QERNSTLGLR LTIDINSPQL QVDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-08FAR1 family protein