PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027173298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 316aa MW: 35095.7 Da PI: 5.9097 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.2 | 1.3e-31 | 115 | 171 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C +kk+ver++ dp++++itYeg H h XP_027173298.1 115 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERCSGDPETLIITYEGLHLH 171 8******************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MADLQPTPWS ADELVGELLD NESPFFIIPD QVAEASNLDV ASNHSPVYNR LMSAVYSGPT 60 MQDIESALSV TEYRNQTEHV SQARVSMVER DLSRTHENNY RYTLRIKSCD NALADDGYKW 120 RKYGQKSIKN SPNPRSYYRC TNPRCGAKKQ VERCSGDPET LIITYEGLHL HFAYPFFPRN 180 LPQQQHVNSP AKKKQRKPTS SSNSQGRNDQ EAQRSFTTSI NDAEESSDNV TYSSPVIPPP 240 PATVGDVNTG WEHKGTEGDY SPQGLLEDVV PLPIRNPLIN PTSVNSSSSS SFPSTPTSPS 300 SISWPPGYST LGFVGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 2e-46 | WRKY family protein |