PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027172696.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 561aa MW: 61571.2 Da PI: 7.2507

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027172696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.3	3.7e-29	280	338	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgynWrKYGqK vkg+ f rsYY+Ct+++C++kk+ver + d+++++i+Y g+H+h+k XP_027172696.1 280 LDDGYNWRKYGQKLVKGNVFVRSYYKCTYSTCRAKKQVERLH-DGRLTDIKYIGKHEHPK 338 59**************************************.*************85 PP
2	WRKY	105.3	3.2e-33	457	515	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+ agC+vkk+vers++dpkvv++tYeg+H+h+ XP_027172696.1 457 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNAGCTVKKHVERSSHDPKVVITTYEGKHDHD 515 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MQPRDSPHNG VPVSPSNSGE FVSCVVPKIE SGSLQQKQIS ASESCEPEAH KVPPLVKNEK 60 DELNQWQSHG AGNHSTAYGE TEVLDSGKDV AISNRVSIVP KKELVSDGQL HASVSSKQLI 120 PENGNRASQF NQVSVQPKEE LGPSEQNLSP HTGSNTPMSG EKLIPESGTH VSQFNHVSII 180 TKMDPDGPEQ EQGTDAGKDA SLPCEGRGTD SSVLEKSLQH MQNTNMRVCT SSSDQEKITY 240 SAKPEKVLYK LQPRRNPDSG VHATQSEQGS NSPRIREKAL DDGYNWRKYG QKLVKGNVFV 300 RSYYKCTYST CRAKKQVERL HDGRLTDIKY IGKHEHPKLQ SSPQCTAFVS PSEVSKADMP 360 AIATSEAEDE LVVAHNDKPQ PIDPAETPRE LAATASNNST GKAVPQLHNP RDDIDNDISP 420 TSKRQKRETC DVHNNQVKKT HCESRQVVHM MSEVDIVNDG YRWRKYGQKL VKGNPNPRSY 480 YRCSNAGCTV KKHVERSSHD PKVVITTYEG KHDHDMPASR TVGHSATESG TNGTTMKGEA 540 KSEIGEHNAV GVDLIVNIGA N

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MQPRDSPHNG VPVSPSNSGE FVSCVVPKIE SGSLQQKQIS ASESCEPEAH KVPPLVKNEK  60
DELNQWQSHG AGNHSTAYGE TEVLDSGKDV AISNRVSIVP KKELVSDGQL HASVSSKQLI  120
PENGNRASQF NQVSVQPKEE LGPSEQNLSP HTGSNTPMSG EKLIPESGTH VSQFNHVSII  180
TKMDPDGPEQ EQGTDAGKDA SLPCEGRGTD SSVLEKSLQH MQNTNMRVCT SSSDQEKITY  240
SAKPEKVLYK LQPRRNPDSG VHATQSEQGS NSPRIREKAL DDGYNWRKYG QKLVKGNVFV  300
RSYYKCTYST CRAKKQVERL HDGRLTDIKY IGKHEHPKLQ SSPQCTAFVS PSEVSKADMP  360
AIATSEAEDE LVVAHNDKPQ PIDPAETPRE LAATASNNST GKAVPQLHNP RDDIDNDISP  420
TSKRQKRETC DVHNNQVKKT HCESRQVVHM MSEVDIVNDG YRWRKYGQKL VKGNPNPRSY  480
YRCSNAGCTV KKHVERSSHD PKVVITTYEG KHDHDMPASR TVGHSATESG TNGTTMKGEA  540
KSEIGEHNAV GVDLIVNIGA N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.1	3e-74	WRKY family protein