PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027172278.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 393aa    MW: 43892.4 Da    PI: 6.9244
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027172278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35e-20169218356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+WvAeIr p++   rkr +lg+f+taeeAa a+++ + +l+ge
  XP_027172278.1 169 YRGVRQRH-WGKWVAEIRLPRN---RKRLWLGTFDTAEEAALAYDREAFRLRGE 218
                     9******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MEDASLHVGD HYADDQYNLN FSKREGKNME HGKEVHQKTV TLDRPLKKIR SPAAISNHHQ  60
TYPRTPMCSP SSRFVFPFAV DHEPQAITRS RQIGVTTQSP AGFHSTSSIP SENHHMISFG  120
PEHDHQELLQ DWKDTLALSP RGRSATTVMM NRLGLVLPHN LPVSPPKIYR GVRQRHWGKW  180
VAEIRLPRNR KRLWLGTFDT AEEAALAYDR EAFRLRGENA RLNFPHLFPG SEAACQMEAP  240
EVSGTSSLSS SCIATETSKL NKFQMPNKQG VVVPSTNGNK TSIITEYTEK GFEYKSSFDE  300
SRSEDIILAD NQAGRISIPP EQGLQGFSDP IMWGRSMTEV LTTAIQGGSS GFPIPSSPMW  360
ENITMTDLLQ QSDGYCLTEN SCAVLDVQMP SIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28140.12e-43ERF family protein