PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027172213.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 504aa    MW: 58497.3 Da    PI: 9.1635
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027172213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.89.4e-1423981298
                    HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    + + + +p +f+ ++ +gk ++     +  +  ++W+vk+     s+  +l++GW+ F+ +n+L +gDfvvF++++++ f   v vf+
  XP_027172213.1 23 E-DGVKIPDSFL-KYlDGKIPQ--NQAVLRRGDEEWRVKI-----SD-QFLREGWRAFAVENELHVGDFVVFEHEENMVF--EVLVFD 98
                    4.4599******.555666444..456667899*******.....43.469**********************9998999..777776 PP
2B344.52.8e-14159245597
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     ++++++l  +rl +p +f++++g+ k +   ++l+d++   W+vkl  +  ++r v++ G k+F ka+++kegD ++++l++ +++++v+ ++
  XP_027172213.1 159 TVKPSTLLYHRLHIPMDFVRANGLRK-C--NMMLRDQREILWTVKL--NLEPRRAVIKCGCKSFLKAQEMKEGDEFMLELIR-NGETPVFNFY 245
                     45667777789***********9995.5..5***************..********************************99.5666787765 PP
3B352.96.5e-17275359693
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     + ++  k+++l++p +fa++++++  +s +l+l+d++ r+W v+l  + +++r y++  G  eF  angLkegD + F+l+++ ++++ 
  XP_027172213.1 275 IEPHCIKRRILYFPMEFARSNNLSD-RSCDLILRDPKKRVWHVEL--KARGRRvYIFCHGLDEFFTANGLKEGDACKFELVEN-GKTPI 359
                     57888999*************8885.667****************..555555599***********************9984.44455 PP
4B354.91.6e-17410494593
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ++++++lk+  l+lp kfa+++g+ + ++ +++++de+ r W+vk+  + + +++ +++GW  F kangLk+gD + F+ ++ +++++v
  XP_027172213.1 410 TIKPYNLKKYVLRLPMKFARRNGLTEMKG-DMIIKDEKQRLWKVKF--EHRANGVAISRGWGYFSKANGLKVGDRFKFEIIK-KGKRPV 494
                     57899*****************9998887.9***************..999999*************************987.555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    
MAMRNKIPPE KPHFFKPILP GFEDGVKIPD SFLKYLDGKI PQNQAVLRRG DEEWRVKISD  60
QFLREGWRAF AVENELHVGD FVVFEHEENM VFEVLVFDPS HCERQFPSID DDGKGGSEKS  120
KAAEAEEIPR SKKVKLEQSD DQEESDSTDQ ICCPYFISTV KPSTLLYHRL HIPMDFVRAN  180
GLRKCNMMLR DQREILWTVK LNLEPRRAVI KCGCKSFLKA QEMKEGDEFM LELIRNGETP  240
VFNFYAKEGL STRKSGHKLS SYDKEPGSPQ FISTIEPHCI KRRILYFPME FARSNNLSDR  300
SCDLILRDPK KRVWHVELKA RGRRVYIFCH GLDEFFTANG LKEGDACKFE LVENGKTPII  360
NFLADLTKDD QPQPQPQPPS FMKTNSKNKA KRLEASSEPE NDDHTSFVST IKPYNLKKYV  420
LRLPMKFARR NGLTEMKGDM IIKDEKQRLW KVKFEHRANG VAISRGWGYF SKANGLKVGD  480
RFKFEIIKKG KRPVMNFHCN FPEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.12e-52B3 family protein