PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027171886.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 253aa    MW: 27182.6 Da    PI: 4.8968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027171886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-194190255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + +  r +lg+f+t  eAa a++aa+ kl+g
  XP_027171886.1 41 TYKGVRQRT-WGKWVAEIREP---N-CgSRLWLGTFDTSHEAAIAYDAAAYKLYG 90
                    69****999.**********8...3.57************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEADGSANGN GNGRQGKKPA NASSRKGCTR GKGGPENASC TYKGVRQRTW GKWVAEIREP  60
NCGSRLWLGT FDTSHEAAIA YDAAAYKLYG DAAKLNLPHL FGRAQNIPDY FTLNTSGGNE  120
SGVQPVPFQQ NSLLNFASSS SSSYPVPQYQ GNEGLFFEMN PNATATGYPT GTATVGITSV  180
RNDNTNVIHD NGNEAVRSEE APMKEVWNSL KSNLPETDDS SIWAEAQAAS PFQVAMNDPG  240
IFDGNLDGNY PWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.18e-37ERF family protein