PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027171870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 27182.6 Da PI: 4.8968 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 5.8e-19 | 41 | 90 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + + r +lg+f+t eAa a++aa+ kl+g XP_027171870.1 41 TYKGVRQRT-WGKWVAEIREP---N-CgSRLWLGTFDTSHEAAIAYDAAAYKLYG 90 69****999.**********8...3.57************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEADGSANGN GNGRQGKKPA NASSRKGCTR GKGGPENASC TYKGVRQRTW GKWVAEIREP 60 NCGSRLWLGT FDTSHEAAIA YDAAAYKLYG DAAKLNLPHL FGRAQNIPDY FTLNTSGGNE 120 SGVQPVPFQQ NSLLNFASSS SSSYPVPQYQ GNEGLFFEMN PNATATGYPT GTATVGITSV 180 RNDNTNVIHD NGNEAVRSEE APMKEVWNSL KSNLPETDDS SIWAEAQAAS PFQVAMNDPG 240 IFDGNLDGNY PWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 8e-37 | ERF family protein |