PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170849.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HB-other

Protein Properties

Length: 1760aa MW: 197258 Da PI: 5.2487

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	53	108	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps+++r+eLA+klgLt+rq ++WF+ rR k++k XP_027170849.1 53 VKRKMKTPSQLEVLEKAYSVDTYPSEAMRAELAMKLGLTDRQLQMWFCHRRLKDRK 108 58999*************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1760 aa Download sequence
MFFGKDLILM EKVEVDGGGS GGSAVAAAAD AGAEGGGYDV VKKNSTPEGE PRVKRKMKTP 60 SQLEVLEKAY SVDTYPSEAM RAELAMKLGL TDRQLQMWFC HRRLKDRKPP GEKRVKKEAS 120 PGMVGALSNG VGKELVGGYG GGMKNDQSLG LVRTALGPTE ILQQHRVVHR SGTALARIGT 180 EMPAVKRYYE PPQALSELRA IAFVEAQLGE RLREDGPVLG MEFDPLPPGA FGSPIGLQKP 240 GVGLYEAQVY ETPDAKVIQG AKRTIHEYQF LPEQPSIRDD IRERALPFQY YGSSTDAQSS 300 RTTLSAGRSF MHGTEQLTPG YSFQGEVDIF PQRNSVLNID IDRPGAHLTR GLETPLIPTE 360 KRVIHDEERL ERKRKSEEAR IARDVEAHEK RIRKELEKQD LLRRKRDEQL RKEMERQDKE 420 RRKEEERLLR EKQREEERYQ REQRREMERR EKFLQKESIR AEKMRLKLEM RREKEAARLK 480 AATERATARR IAKESVELID DERLELLELA ASSQGLPSTL ALDNEALQNL ESHRDSLTEF 540 PPKTVCLKRP FGMQPWVESE ESVGSILMIW RFLITFADVL GLWPFTLDEI VQAFHDYDSR 600 LLGEIHIALL RIIIRDIEDI ARTPATAVGA NQNAAIPGGG HPQIVEGAYS WGFDILSWHQ 660 HLNPLTWPEI LRQFALAAGF GPKLKRRNVE QSHPHDENEG KDGIDIIAGL RNGAAAENAV 720 AKMRQRGISN LGRSRHRLTP GTVKYAAFHV LSLEGSKGLT ILEAVDKIQN SGLRDLTTSK 780 TPEASVAAAL SRDTKLFERT APSTYCVRAP YRKDPADAEA ILATARERIF AYKNEFLDAE 840 EPDEAEKEDA ERDEDSESDM ADDPDINDLD TERNLNKESL HSFEPSTSGV KHHSGNIKEK 900 SHVQFTESSG SSIANTNGSF DIVQPEGMEG ASGSQSAATV GIHIEAANNE DNVIDESSTV 960 ELWVQGLTEG DYSDLSVEER LDALVALIGV ANEGNSIRVV LEERLEAANA LKKQMWAEAQ 1020 LDKRRVKEEY ALKVQSSSFA GSRSEQNSSI TSSDGRQNTF LNIDGRNESL STNPKNHQMD 1080 LGDSSRIPNS SASTTAERNM MLQEFSGPDV LLQQSAYAAE KSRLEMKAYI GQKAEEIYVY 1140 KSVPLGQDRR RNRYWQFIAS PSQNDPGSGR IFVELHDGRW RLIDSAEGFD GLLASLDVRG 1200 TRESHLHSML QRIEVSFKET AKKNLCSRST SQDADDVKEE VSEESPNSMV SDMMEPLASI 1260 RIKCESYGLD KNVTLERYRD FEKWMWDECF SIMKLRALKY GKTLRTRLLS ICSHCHDLYF 1320 FENQHCPFCH KNCSILVGTF NFGEHVSYCK EKQEEVQNRT LVKLEPSSPL RIRLLKAQLA 1380 SLEASLLPEA VKAFWSEDYR RSWGMKLEIA SSAEDLLQIL SLLENAVKRD FLVPDYETAN 1440 ELLGFENLKG GMVDNTPTLE MTAVLPWIPQ TTSAVALRLM DLDTSICYTL QQKDDSEKVK 1500 GARHIIRIPT RNTGATNAAE NVRTERPQDA GTVPEDTWDG PGAKLNSSRR AHRQVARPQR 1560 RVSESRNGSG QGTSAAKRDK FGPLLGWKGR PNGRGGRKRG RRTVRSRQNP TKKRTDIASK 1620 RASAGADIYD KTPSSYQHEW DEEGTTQIQA EVAGNESSSE RSGFDDDNDL MVEDYSGCFG 1680 TKSENLAKGI DYGMGVENGN DELDDDEEDD EEEADERPGE QVVEEYFDSD SEEDANISVS 1740 GEKMGNLNKG SEFSSSDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1760 aa Download sequence

MFFGKDLILM EKVEVDGGGS GGSAVAAAAD AGAEGGGYDV VKKNSTPEGE PRVKRKMKTP  60
SQLEVLEKAY SVDTYPSEAM RAELAMKLGL TDRQLQMWFC HRRLKDRKPP GEKRVKKEAS  120
PGMVGALSNG VGKELVGGYG GGMKNDQSLG LVRTALGPTE ILQQHRVVHR SGTALARIGT  180
EMPAVKRYYE PPQALSELRA IAFVEAQLGE RLREDGPVLG MEFDPLPPGA FGSPIGLQKP  240
GVGLYEAQVY ETPDAKVIQG AKRTIHEYQF LPEQPSIRDD IRERALPFQY YGSSTDAQSS  300
RTTLSAGRSF MHGTEQLTPG YSFQGEVDIF PQRNSVLNID IDRPGAHLTR GLETPLIPTE  360
KRVIHDEERL ERKRKSEEAR IARDVEAHEK RIRKELEKQD LLRRKRDEQL RKEMERQDKE  420
RRKEEERLLR EKQREEERYQ REQRREMERR EKFLQKESIR AEKMRLKLEM RREKEAARLK  480
AATERATARR IAKESVELID DERLELLELA ASSQGLPSTL ALDNEALQNL ESHRDSLTEF  540
PPKTVCLKRP FGMQPWVESE ESVGSILMIW RFLITFADVL GLWPFTLDEI VQAFHDYDSR  600
LLGEIHIALL RIIIRDIEDI ARTPATAVGA NQNAAIPGGG HPQIVEGAYS WGFDILSWHQ  660
HLNPLTWPEI LRQFALAAGF GPKLKRRNVE QSHPHDENEG KDGIDIIAGL RNGAAAENAV  720
AKMRQRGISN LGRSRHRLTP GTVKYAAFHV LSLEGSKGLT ILEAVDKIQN SGLRDLTTSK  780
TPEASVAAAL SRDTKLFERT APSTYCVRAP YRKDPADAEA ILATARERIF AYKNEFLDAE  840
EPDEAEKEDA ERDEDSESDM ADDPDINDLD TERNLNKESL HSFEPSTSGV KHHSGNIKEK  900
SHVQFTESSG SSIANTNGSF DIVQPEGMEG ASGSQSAATV GIHIEAANNE DNVIDESSTV  960
ELWVQGLTEG DYSDLSVEER LDALVALIGV ANEGNSIRVV LEERLEAANA LKKQMWAEAQ  1020
LDKRRVKEEY ALKVQSSSFA GSRSEQNSSI TSSDGRQNTF LNIDGRNESL STNPKNHQMD  1080
LGDSSRIPNS SASTTAERNM MLQEFSGPDV LLQQSAYAAE KSRLEMKAYI GQKAEEIYVY  1140
KSVPLGQDRR RNRYWQFIAS PSQNDPGSGR IFVELHDGRW RLIDSAEGFD GLLASLDVRG  1200
TRESHLHSML QRIEVSFKET AKKNLCSRST SQDADDVKEE VSEESPNSMV SDMMEPLASI  1260
RIKCESYGLD KNVTLERYRD FEKWMWDECF SIMKLRALKY GKTLRTRLLS ICSHCHDLYF  1320
FENQHCPFCH KNCSILVGTF NFGEHVSYCK EKQEEVQNRT LVKLEPSSPL RIRLLKAQLA  1380
SLEASLLPEA VKAFWSEDYR RSWGMKLEIA SSAEDLLQIL SLLENAVKRD FLVPDYETAN  1440
ELLGFENLKG GMVDNTPTLE MTAVLPWIPQ TTSAVALRLM DLDTSICYTL QQKDDSEKVK  1500
GARHIIRIPT RNTGATNAAE NVRTERPQDA GTVPEDTWDG PGAKLNSSRR AHRQVARPQR  1560
RVSESRNGSG QGTSAAKRDK FGPLLGWKGR PNGRGGRKRG RRTVRSRQNP TKKRTDIASK  1620
RASAGADIYD KTPSSYQHEW DEEGTTQIQA EVAGNESSSE RSGFDDDNDL MVEDYSGCFG  1680
TKSENLAKGI DYGMGVENGN DELDDDEEDD EEEADERPGE QVVEEYFDSD SEEDANISVS  1740
GEKMGNLNKG SEFSSSDYSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein