PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170311.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 849aa MW: 97494.8 Da PI: 6.5906

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170311.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83	5e-26	91	193	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ +e++ +ra +t+Cka+++vk++ d+kw ++++e+ XP_027170311.1 91 FYQEYARSTGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYEKSvnrprsrqgnrqdSENATGRRACAKTDCKASMHVKRRPDAKWIIHRFEK 185 9****************************************999999999999887666666799************************** PP FAR1 84 eHnHelap 91 eHnHel p XP_027170311.1 186 EHNHELLP 193 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MDIDLRLPSE EHDKEDEESN GLAHMLDGEE EKPHNEDGVS GNMVDIEDKL HAQNGGGMII 60 PVGDFVESKE DILLEPLAGM EFESLAEAYA FYQEYARSTG FNTAIQNSRR SKTSREFIDA 120 KFACSRYGTK REYEKSVNRP RSRQGNRQDS ENATGRRACA KTDCKASMHV KRRPDAKWII 180 HRFEKEHNHE LLPAQAVSEQ TRKMYAAMAR QFAEYKNLVG LKSDSRSPFE KSRNQAIEVG 240 DASCLLEFFN QMQSTNSNFF YAVEISEDQR LKNFFWVDAK SRYDYANFSD VVAFDTTYVR 300 SKYKMPLALF VGVNQHYQFM LLGCALVSDE SDTTYSWVMR TWLKAMGGQP PKLIITDQDM 360 VLKSVVSEVF PSAYHYFFLW HIVGKVTETL SHVIKQNEKF MVKFEKCIYR SWMEEEFEKR 420 WLKLVDRFEL KENELVQSLY ADRTKWVPLF LTNAFLAGMS TVQRSESVNS FFDKYLHKKT 480 TVQEFVKQYD AILQDRYEEE AKADSDTWNK QPALKSPSPF EKHVASIYTH AVFKKFQVEV 540 LGAVACIPKR ERQEEMTITF RVEDFEKNQE FFVTLNELKS EVSCVCHLFE YKGFLCRHAM 600 IVLQICGIST IPSQYILKRW MKDAKSRYSV GEGSEQLQSR VQRYNELYQR AMKLIEEGSL 660 SQESYNFALR ALDDAFGNCV SVNNSNKNIA DAGTSTTPGL LCIEEDEQSR SMGKTNKTNK 720 KNSTTKKRKV NSDSDIMTVG ASDGLQPLEK LSSRPVNLDG YFGHQQGVQG MLNLMAPTRE 780 NYYASQQTIQ GLGQLNSIAP SHDSYYGSQP TIHGLGQMDF LRASSFTYGI REEPNIRSTQ 840 LHDDASRHA

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MDIDLRLPSE EHDKEDEESN GLAHMLDGEE EKPHNEDGVS GNMVDIEDKL HAQNGGGMII  60
PVGDFVESKE DILLEPLAGM EFESLAEAYA FYQEYARSTG FNTAIQNSRR SKTSREFIDA  120
KFACSRYGTK REYEKSVNRP RSRQGNRQDS ENATGRRACA KTDCKASMHV KRRPDAKWII  180
HRFEKEHNHE LLPAQAVSEQ TRKMYAAMAR QFAEYKNLVG LKSDSRSPFE KSRNQAIEVG  240
DASCLLEFFN QMQSTNSNFF YAVEISEDQR LKNFFWVDAK SRYDYANFSD VVAFDTTYVR  300
SKYKMPLALF VGVNQHYQFM LLGCALVSDE SDTTYSWVMR TWLKAMGGQP PKLIITDQDM  360
VLKSVVSEVF PSAYHYFFLW HIVGKVTETL SHVIKQNEKF MVKFEKCIYR SWMEEEFEKR  420
WLKLVDRFEL KENELVQSLY ADRTKWVPLF LTNAFLAGMS TVQRSESVNS FFDKYLHKKT  480
TVQEFVKQYD AILQDRYEEE AKADSDTWNK QPALKSPSPF EKHVASIYTH AVFKKFQVEV  540
LGAVACIPKR ERQEEMTITF RVEDFEKNQE FFVTLNELKS EVSCVCHLFE YKGFLCRHAM  600
IVLQICGIST IPSQYILKRW MKDAKSRYSV GEGSEQLQSR VQRYNELYQR AMKLIEEGSL  660
SQESYNFALR ALDDAFGNCV SVNNSNKNIA DAGTSTTPGL LCIEEDEQSR SMGKTNKTNK  720
KNSTTKKRKV NSDSDIMTVG ASDGLQPLEK LSSRPVNLDG YFGHQQGVQG MLNLMAPTRE  780
NYYASQQTIQ GLGQLNSIAP SHDSYYGSQP TIHGLGQMDF LRASSFTYGI REEPNIRSTQ  840
LHDDASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein