PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027170268.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Nin-like
Protein Properties Length: 306aa    MW: 32899.8 Da    PI: 10.0606
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027170268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK67.42.1e-213178249
          RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                    +k+++++++sk+Fslp+ dAA +Lgvc++vLK+iC ++G+ RWPhRk 
  XP_027170268.1 31 TKSLTFDQVSKFFSLPLSDAADTLGVCPSVLKKICHENGLVRWPHRKF 78
                    799********************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSALQSRPPN PTLNPYPNPN PNPKAAPLPN TKSLTFDQVS KFFSLPLSDA ADTLGVCPSV  60
LKKICHENGL VRWPHRKFLS GKSIEQIKED AARAKNKLLN EVPKDAGQGS DALANSTVSL  120
LAGTGTQLQN KTTVAEVSKA QSVMQLQGNK NPQIGSPPKL TGLNLTKGTS TNEDEFKYGF  180
PSHGLSTVSY KWWGNSSNSG SKDTPGTAKD ETQGNRKSPV NSANGSTLAS RTDGQKCENE  240
ARESSTDSPG EGVLSSLRKR AATEGHKALK LGAHRRYVME LDQTKRSVLQ QIFKSSLPSE  300
WGDDSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.22e-10Nin-like family protein