PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027169957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 249aa MW: 28239.1 Da PI: 5.7367 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.8 | 1.9e-13 | 154 | 236 | 1 | 79 |
EEEE-..-H.HHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-E CS B3 1 ffkvltpsd.vlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDf 79 f+k l+ d lk++rl++pkk+ae++ ++++++++ l+++d++g+ W+++++y +++s++y+l+ G ++F +++ ++gD+ XP_027169957.1 154 FEKLLSATDaDLKLARLIIPKKCAEAFfpDISEPRGFLLKIQDTEGKDWDFNYRYwiNGGSKMYILE-GLRDFMISKRWQAGDT 236 55666544415677***************99999*********************544445556666.**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MGSTSTSSSS KISCFQCEET SSSFDHFRNG WRLRSGEFAQ LCPRCASIYE EGKFCEAFHS 60 NDDGWRDCES CGKLVHCGCI VSFNAYLLLD FGGVICMECS RINFALARSR CLFLEGQPDI 120 TRQTVIEPQY RPRSSEMEVQ QISRNFECVV TPLFEKLLSA TDADLKLARL IIPKKCAEAF 180 FPDISEPRGF LLKIQDTEGK DWDFNYRYWI NGGSKMYILE GLRDFMISKR WQAGDTGGTH 240 QLLPTLGVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21550.1 | 2e-33 | B3 family protein |