PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169842.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 433aa    MW: 50022.9 Da    PI: 5.4056
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1484.9e-46882132128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     ppG+rF P+d el+v+yL+kk+++++l+  + i++v++y++ P ++  +    +ekewyfF++r++ky++g+r+nrat +gyWkatg dk+v + 
  XP_027169842.1  88 PPGYRFCPKDGELIVFYLRKKIAKDELPR-NQIRHVNLYQHSPDKISeRYPPIGEKEWYFFTPRNRKYRNGERPNRATGTGYWKATGADKPVNH- 180
                     9**************************99.77**************8445556999**************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+lvg +k Lvfy+g+ pkg+kt+W+mheyr+
  XP_027169842.1 181 DGSLVGFRKALVFYEGKPPKGVKTNWIMHEYRV 213
                     999****************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MEMDQQNQPI REVFGTSPNT IQSLPPPFNE LQQEKPLLLP TSSTELQQEE PLLLAGSSSN  60
ASSNNDGVNE FFDEEEEFID HAFFESFPPG YRFCPKDGEL IVFYLRKKIA KDELPRNQIR  120
HVNLYQHSPD KISERYPPIG EKEWYFFTPR NRKYRNGERP NRATGTGYWK ATGADKPVNH  180
DGSLVGFRKA LVFYEGKPPK GVKTNWIMHE YRVKEPPRKR SNTMDMRLDD FVLCRIYKKT  240
DKSFKSRPRN EDSEDLDQND YPTPQGNERL DQNNAYPLDM DMGNRNDLGG LDRELKAFEA  300
SSGLVQSEYH IGLHEMSNVM GTSLLADSVK CFNNNFQIPF NCGAKPVNYK GFVYPMENVL  360
TPKYLREAPD VKPRKAMWNI TKDYETFNLS PEIDFGTTID FPDLDNLMNN RPSNSCFENS  420
NNPFDSPPMP RRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.27e-55NAC family protein