PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169660.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 599aa MW: 64619.5 Da PI: 6.5133

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.6e-30	271	330	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+k+v+r aed +++++tYeg+Hnh+ XP_027169660.1 271 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApNCPVRKQVQRYAEDMSILTTTYEGTHNHP 330 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MDMEAAYGGN SVKKEDQEKK AESSGDEDCC TEEVLHKVGN GRRAQDDKIN QSLPNRKDFT 60 SSIQGSFMPK MEMSSSEFNS NVSSSALAGR ADLLKSTKAE MGEVMEENQK LRMHLDRVMK 120 EYRALQMQFH DMVQQEPNKS SSTISTHRET GEPELVSLSL GMSSSDGKKD DHFSRKIHGK 180 EKVDNDDDDK EVLALGLDCK FELPKYQENE PSPNPSLEAS SGEVKEEEGG KTWPPKNSLK 240 NVRNEEDEVS QQNPAKRARV SVRVRCDTPT MNDGCQWRKY GQKTAKGNPC PRAYYRCTVA 300 PNCPVRKQVQ RYAEDMSILT TTYEGTHNHP LPISATAMAS TTSAAASMLM SGSTTSTSGL 360 SPSAASILSS ASFNGLNFYL SDNTKPTPIY LPNSSLSSSS SCPTITLDLT TSSNASSHLG 420 KLGSFPPGSY STTQNLNFSS LESNALPLSW SNGLQETHYQ SYLQKNNSMS NSSSQQSLPA 480 ETLAAATKAI ASDPSFQSAL AAALTSIIGP GTSSTARVLG SQTAADKSGH NLKLNDQSFP 540 ILSSFPPSTS TVNKCASTFL SSSNPPSSAN SQPGSLMFLS PSLSFPSPNN NSTSNVRLH

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MDMEAAYGGN SVKKEDQEKK AESSGDEDCC TEEVLHKVGN GRRAQDDKIN QSLPNRKDFT  60
SSIQGSFMPK MEMSSSEFNS NVSSSALAGR ADLLKSTKAE MGEVMEENQK LRMHLDRVMK  120
EYRALQMQFH DMVQQEPNKS SSTISTHRET GEPELVSLSL GMSSSDGKKD DHFSRKIHGK  180
EKVDNDDDDK EVLALGLDCK FELPKYQENE PSPNPSLEAS SGEVKEEEGG KTWPPKNSLK  240
NVRNEEDEVS QQNPAKRARV SVRVRCDTPT MNDGCQWRKY GQKTAKGNPC PRAYYRCTVA  300
PNCPVRKQVQ RYAEDMSILT TTYEGTHNHP LPISATAMAS TTSAAASMLM SGSTTSTSGL  360
SPSAASILSS ASFNGLNFYL SDNTKPTPIY LPNSSLSSSS SCPTITLDLT TSSNASSHLG  420
KLGSFPPGSY STTQNLNFSS LESNALPLSW SNGLQETHYQ SYLQKNNSMS NSSSQQSLPA  480
ETLAAATKAI ASDPSFQSAL AAALTSIIGP GTSSTARVLG SQTAADKSGH NLKLNDQSFP  540
ILSSFPPSTS TVNKCASTFL SSSNPPSSAN SQPGSLMFLS PSLSFPSPNN NSTSNVRLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18860.1	2e-51	WRKY family protein