PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169515.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 843aa MW: 96982.6 Da PI: 7.6964

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.5	1.1e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++l+leHnHel XP_027169515.1 26 QFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIALFRgTMKYRVHDLVLEHNHEL 113 6***************9998.8999************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
MDCSKLAEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC 60 KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IALFRGTMKY RVHDLVLEHN HELHIAQCAH 120 MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELLGKEAGGM ENVGYTREDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY QFFGDVVTFD 240 TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFVEA MCGKRPSTIL 300 TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG TCMYEFEEVE 360 QFNRVWEAMV KKHNLENNEW LSGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV 480 AFQNEYGEST AMVILRQQDA AMIVEFAVMR YDGGPERIVV FNRNDLSVRC SCKKYENEDI 540 LCGHALKVFD TLGIKIIPPE YIKRRWTKRA RAGVCFDRRR REVVADPKIM ISTRYRELAP 600 AMIKVATRAA MSEDTSKVAI TVISDLAKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN 660 EMGEAVVARC IKKRGGGKKS RVMRSWIDKF DRVKRKSRLS RTTQTTASES EPTSVSVEEP 720 MFMGCRSSTD SVSTHSMSQT HSMSQTVNGP PNAIAPNIDE SETVHLLANQ GPPTSVPTEW 780 MHPRFSIFSK YNSVRDVLME ERAALLTHCD VDAYHVFAPS PSYTVTGRYD SPIQQFLGQE 840 SDV

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

MDCSKLAEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IALFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELLGKEAGGM ENVGYTREDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY QFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFVEA MCGKRPSTIL  300
TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG TCMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LSGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMIVEFAVMR YDGGPERIVV FNRNDLSVRC SCKKYENEDI  540
LCGHALKVFD TLGIKIIPPE YIKRRWTKRA RAGVCFDRRR REVVADPKIM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDLAKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN  660
EMGEAVVARC IKKRGGGKKS RVMRSWIDKF DRVKRKSRLS RTTQTTASES EPTSVSVEEP  720
MFMGCRSSTD SVSTHSMSQT HSMSQTVNGP PNAIAPNIDE SETVHLLANQ GPPTSVPTEW  780
MHPRFSIFSK YNSVRDVLME ERAALLTHCD VDAYHVFAPS PSYTVTGRYD SPIQQFLGQE  840
SDV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	563	581	KRRWTKRARAGVCFDRRRR
2	577	582	DRRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-110	FAR1 family protein