PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027169350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TALE | ||||||||
Protein Properties | Length: 473aa MW: 52549.9 Da PI: 5.1874 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.6 | 9.9e-09 | 415 | 447 | 23 | 55 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_027169350.1 415 PYPTEADKIALASSTGLDQKQINNWFINQRKRH 447 8*****************************885 PP | |||||||
2 | ELK | 28.5 | 3.6e-10 | 367 | 388 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K+ Ll KYsgy++sL+ EF+ XP_027169350.1 367 EIKEKLLVKYSGYISSLRREFC 388 89*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MASGLCHMLL FFGEFGMEVA ARALVRIKNG REWGSSRRGE KRREEAGEEG GRERRGGKEE 60 GGGGKKKEKA RGRKVEDGVI AVGGNVGAAA VFTFLLVCTL ELNTPTVHFL TPSLQLLLHF 120 DTDLSNPRSA YLQQFTDLLH HNLKAMEDMY GLPSSNTTST EGNPSTCQPP IAASLKEDDF 180 EAFGASWSSA LFDSSASPDA AGAITCNSIK RSSTTGTGSS SSQEESFSAM KASISSHPLY 240 TKLLEAYIDC QKVGAPPEIA MFLDEILQEN QLSINNTGTY CVNDDPELDE FMETYCDVLS 300 KYKLDLEKPY DEASKFLTNM ESQLSNLCNN TPRMLDEAAR SSNEDGSSGE VEVLQEKSFN 360 GPAEVNEIKE KLLVKYSGYI SSLRREFCTK KKKGKLPKDA RQILLNWWKV HCDWPYPTEA 420 DKIALASSTG LDQKQINNWF INQRKRHWKP PENLQYPSLI NNNEYGSFFL NVD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 64 | GGKEEGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.1 | 3e-83 | TALE family protein |