PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027169189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 28952.3 Da PI: 8.4604 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.5 | 4.5e-15 | 60 | 108 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a+++a + l+g XP_027169189.1 60 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDNASRLLRG 108 67******.7*********42...36*********************998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDGSMDAQSS KVQSQSQDPF TSLPLLPMMA TATPPESIEV QVDMESPRRE NITIHGRRRF 60 LGVRQRPSGR WVAEIKDSSQ KLRLWLGTFD RAEEAALAYD NASRLLRGRN AKTNFTYNGT 120 MDTREENLSL LGKNPRLYQL LKHAITKNLA KSSALDSSKS TRNFTDQRFC EGESSPVDHV 180 VTTVEDNIIG NEDHDQSQEK RGLRGISLGS SKVYSSVIVA PSFSASLSQG REEPENNSQG 240 TLFNSLFYQT NVMSHHKLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-25 | ERF family protein |