PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169186.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 357aa    MW: 38637.4 Da    PI: 5.1579
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-192575256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    +y GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a+++l+g+
  XP_027169186.1 25 RYVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDEAARALRGA 75
                    79*******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MKPNSSPTDD GVRSRRKTSS RGHHRYVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED  60
AARAYDEAAR ALRGANARTN FELPENDDDD LPDKGEPFSF EEACRTEEPE GLVGALKAKL  120
YSETNKTSLG ILNINSQANT ASSQQSTPQS TVNLPVFSFN NISNAAAANK PQTSAAPSLA  180
NNIGSSSVGN SINPMVLGHN YDHSLRQNHD QVEEMVQNNS ASAMQWQIGS PASGMMWANN  240
QHGVAWAAQI NHVQEQDPLF TTSTTTSAWS IPSTTSQSSV EMPYSFPASS SSGQLMTSNT  300
GNVDMLHVQE VVSQMSGLNS GVAMPSEQQI LHCENTNWGS GVNATWDPFL YVSSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-17ERF family protein