PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169171.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 745aa MW: 86214.1 Da PI: 7.2988

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.1	9.6e-26	29	114	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +gkw+++++++eHnH+l p XP_027169171.1 29 LYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGKWYIHSFVKEHNHDLLP 114 7*************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence
MESSSAPVNS NFEPREDVEF DSHEAAYELY KEYAKSVGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRPNGKWY IHSFVKEHNH DLLPAQAHFF 120 RSHRNVDPLK NDSKVRRRKI LASMTKQYGV YQPSGPVENF IRNQHDRGRS LTLEEGDGQG 180 LLDFFMHMQE ENPRFFYAVD FNEEHRLRNV FWVDAKGIDD YAYFSDVVLF DTTYFSNKYK 240 LPLVLFIGVN HHIQPILLGC ALIADETVFT FAWLMQTWCL AMGGHGPQVL LTDQNHSMKA 300 AVAAVFPDTR HYFSLWQALD KIPRQPQYLN LWHETFLAKF RKCIHKSWTE EQFEKRWWKL 360 VERFNLRDDQ WMHSLYENRR LWVPTFMRDF SFSGLSVASR SESPSSFFDK YVLAETSLKE 420 FVRQYQLVLE DRYEEEAKAN FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA 480 ACHLKKEKED ESSITYAVKD FENNEDFMVE WSEQKSEIYC SCRSFQYRGY LCRHAIVVLQ 540 MSGVFTIPSK YILQRWTNAA TSRHSISERL DEVQNKVRRY NDLCRRAIIL GEEGSLSQES 600 YNIAVGAIRE AQRQCTSVSN SADNNLRTGT STALAIHGTE EANQGDIAMD VGEVRGNMVT 660 RTNKSSKRAH SGKERESEVS NSNRKGKVAM EPEAANVGSH GDFHSVDMPS GLEYPAMYPR 720 FLTTLLRSGD MSKRSVEMLG EMLEE

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence

MESSSAPVNS NFEPREDVEF DSHEAAYELY KEYAKSVGFG TAKLSSRRSR ASKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRPNGKWY IHSFVKEHNH DLLPAQAHFF  120
RSHRNVDPLK NDSKVRRRKI LASMTKQYGV YQPSGPVENF IRNQHDRGRS LTLEEGDGQG  180
LLDFFMHMQE ENPRFFYAVD FNEEHRLRNV FWVDAKGIDD YAYFSDVVLF DTTYFSNKYK  240
LPLVLFIGVN HHIQPILLGC ALIADETVFT FAWLMQTWCL AMGGHGPQVL LTDQNHSMKA  300
AVAAVFPDTR HYFSLWQALD KIPRQPQYLN LWHETFLAKF RKCIHKSWTE EQFEKRWWKL  360
VERFNLRDDQ WMHSLYENRR LWVPTFMRDF SFSGLSVASR SESPSSFFDK YVLAETSLKE  420
FVRQYQLVLE DRYEEEAKAN FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA  480
ACHLKKEKED ESSITYAVKD FENNEDFMVE WSEQKSEIYC SCRSFQYRGY LCRHAIVVLQ  540
MSGVFTIPSK YILQRWTNAA TSRHSISERL DEVQNKVRRY NDLCRRAIIL GEEGSLSQES  600
YNIAVGAIRE AQRQCTSVSN SADNNLRTGT STALAIHGTE EANQGDIAMD VGEVRGNMVT  660
RTNKSSKRAH SGKERESEVS NSNRKGKVAM EPEAANVGSH GDFHSVDMPS GLEYPAMYPR  720
FLTTLLRSGD MSKRSVEMLG EMLEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein