PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169019.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 323aa    MW: 34716.4 Da    PI: 8.5894
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00042138160123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_027169019.1 138 FSCNYCQRKFCSSQALGGHQNAH 160
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MKAKTTRKEA CDLSHETSAS SSSSSTIASL SDTNSLACPN NSPSMDSPKL EEVQHQNHKQ  60
EDDDKDVKTP HLALDLSLAS AKDLKPELNL IDCLHNNMGV SSQINHPSST SASTDAINPL  120
GVNNNSASNN QEPERRVFSC NYCQRKFCSS QALGGHQNAH KRERTIAKRG NRIGGSTGGA  180
SSSSAAAFGH DSLLQRYPSM ASLPLHGSFN NNRSLGIQAH SMIPKPAYFA SNHVGFSPMY  240
GQAGWSRKPL DQQPAIGRLA PENYHMGSSS IGGAARFDTN INQKFSTPVV EGIGGSYKWD  300
SGPPPNLKTS QEELKKLDLS LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.16e-38C2H2 family protein