PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027168618.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 403aa    MW: 45025.5 Da    PI: 4.5181
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027168618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.7e-19130179255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  XP_027168618.1 130 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDTEARRIRG 179
                     69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MCGGAIISDF IPPSGSSRRL TADLLWGTGA DFPGTKKDIN KKKNNKKNTS DLYSKPLRSE  60
VVDLDDEFET DFQEFNDHSD DEVEELEDVK PFGFSASKHS AIPSRGTKYG KSSDSSDESE  120
KYSKRKRKNQ YRGIRQRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY DTEARRIRGK  180
KAKVNFPDET QGSASRRPVA VNPQKLQVKE TPGPVQPTLS ESMTFTSSME NDYYNSLNLV  240
EEKPPTKQFG YADVYPTIGE MEFKSFPQSD CASLYFNSDQ GSNSFDCSDF GWGEQCPKTP  300
EISSILSSAI EVEESQFSED TNPSKKLKSS LDQVPAADND NKLSEELSAF ESQMKFDQMP  360
LFDGNWEASV DTFLNGDATQ GGGNAMEDLW TFDDISAMMG GVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.35e-64ERF family protein