PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027168531.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 298aa    MW: 32041.4 Da    PI: 6.7887
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027168531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000512042273255
                     ..TTS-STCHHHHHHHHHHHHHHH CS
             HLH  32 kapskKlsKaeiLekAveYIksLq 55 
                     ++p+ K + a++L +A+ YI+ Lq
  XP_027168531.1 204 AQPALKTDTASVLSEAIGYIRFLQ 227
                     68999******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MMAGNPNWWS MNSMHPQSHQ HQQFPSTTTF HSPAPPPPPL PPQYNLYGGS SSPLSANSLS  60
DHHPNQDFPR SWRQLLLGGL ANEQERFVGS PFQNKKLENW EDQTLNPSLR VPVSDVKQEV  120
ALSTSVLFGA AADEEFQAST RPSWSQVVQA SSPTSCVTSL SSNLLNFSSS KAEGRNQNPE  180
NSSECNSSIA GGVSKKPRIQ HSTAQPALKT DTASVLSEAI GYIRFLQAQI EALSSPYLGN  240
VSGGSGSMGQ GHQQQSVVQD RPKDLKSRGL CLVPISCTQH VGSDNGADYW APALGGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-33bHLH family protein