PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027168364.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 182aa    MW: 20864.4 Da    PI: 6.1237
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027168364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-18755254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  XP_027168364.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 55
                    69******9.**********8.....334**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MGRPEQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR  60
TNFAYNDNDP DSSSTKFLSA TLIAKLQRCH MTSLKMVNKR PVLAQENQEQ QCGSRGNRVL  120
DGIGQRDGEM QFVVPLNQDR CESQGESLSG QEFKSLEDDH IEQMIQELLD YSPVELSCVM  180
QN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.17e-55ERF family protein