PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027168081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 372aa MW: 42816.8 Da PI: 4.3319 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48 | 3.4e-15 | 138 | 222 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++e+ L++a ++ + +r++l+ W+ev++k+ ++ ++ r+ +qC+++++ l+k+ykk+k+ + t + +s+++yf++++ XP_027168081.1 138 WSEHETFILLDAWGDKFLQHGRKSLRSEEWQEVAEKVsQQSKIDRTDTQCRNRLDTLKKKYKKEKAKLAE-TVNFVSKWVYFQKMD 222 *************************************778899**************************9.578888********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MDDTEDDARY PPNTYGMSQG YGSSNRQKLP VRNAGQNVIN RYVEDDDVDD EEEEVEDEEE 60 DDDNEENGVQ RVERDEFDDD NEDDDDDDYG DMQRHPKKRK LKSLLSSYEF APRVPATSAA 120 PVPVPKPSFG GRNAVADWSE HETFILLDAW GDKFLQHGRK SLRSEEWQEV AEKVSQQSKI 180 DRTDTQCRNR LDTLKKKYKK EKAKLAETVN FVSKWVYFQK MDMLLSSPPQ QAGLSCGVDS 240 GEYVFMNPGE YLNRSNGLDE MRDSPGISES AEAEEDDSEG LPPKRTKTVR DRGNGASFKL 300 LADSIEKFSE IYEKIENSKR QQILELEKMR MDFHRELELQ KRQILERAQA EIAKIRQGDD 360 EDNDVSAENI SR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 9e-70 | Trihelix family protein |