PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027167950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 32658.7 Da PI: 9.8304 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.3e-20 | 103 | 152 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae Aa a+++a+++++g XP_027167950.1 103 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 152 7********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
KKGSQRSKTV DRRHGKRPLS SRESEEKEEQ QQQQQHQLFP FYSARSQHDM TAMVSALSQV 60 IGSTDNNNSV AVVGNYPALA DPQSAPAIEN RAPQEQGNQR RRHYRGVRQR PWGKWAAEIR 120 DPKKAARVWL GTFETAEAAA LAYDEAALRF KGNKAKLNFP ERVQGKTEYG YLTTRQDARV 180 VADQQVSYSH SNRSFPPPHE YPHILQYAEL LRSGDQNNLH DEVISSSTSS FPGGPLASQS 240 SSGSSSNISS QEQGQQQFLQ FQSPYNVGRT SSSGNSEMWE EFHNNTYARR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 4e-39 | ERF family protein |