PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027167932.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 298aa    MW: 32770 Da    PI: 10.1796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027167932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.8e-20159208255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  XP_027167932.1 159 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 208
                     59*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSRYAYCCSS EPEPTTMNIN NPNLNPRAPY VPKLQLFETT DEKLLPQICA QYNGLAGPLL  60
SFSPFSSSKF VEPQSQTRLS NDISWPSPSV ADDWDVKPDN KPPVLEGIAA VVGEHVLYGN  120
SNINKYPACN GSSDGSEKLF RPGVEKGRLG GGVGGVQKNY RGVRKRPWGR WSAEIRDRIG  180
RCRHWLGTFD TAEEAARAYD AAARRLRGSK ARTNFQIPPV LPLPSPTSSS SSFEVKKTRA  240
NHARRKMNKS QKCAVVTSVA HLFSRNPANE AKGSVNLELD LKLGDSFSNK TRASSMVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.13e-24ERF family protein