PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027167628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 284aa MW: 32124 Da PI: 8.4885 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 76.4 | 4.6e-24 | 40 | 134 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWtkqe+l Lie+++ e++ r+g+ + +p+W++vs+++r +g++r+p+qC+++w+nl ++kki+++e++ ++e +s + + ++l+ XP_027167628.1 40 RWTKQETLILIEGKNIAESQGRKGRrsssifvtgQHEPKWDSVSSYCRLHGVNRGPVQCRKRWSNLVSDFKKIRTWESQVKEEGESFWMMRNDLR 134 8**************9999999886667888888**********************************************999999999999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MAPGPNDRLE KATSSASVLD EEHQAVERTN SENKSTRHPR WTKQETLILI EGKNIAESQG 60 RKGRRSSSIF VTGQHEPKWD SVSSYCRLHG VNRGPVQCRK RWSNLVSDFK KIRTWESQVK 120 EEGESFWMMR NDLRREKKLP GHFDREVHAV LNGNSYQAVM GMSVDGREAV GTCVADTEDD 180 DEEDVNRGIE TGVVFDSGTH ARPETLISHL EKCAQGKIFR GPNVQVARES PRSNSPAPMP 240 LSGLIHAQVS FHPRLQQATN LVDCSKLPPT SFYLLFYTFK RYTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-57 | Trihelix family protein |