PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027167587.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 577aa MW: 67411.8 Da PI: 7.7002

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027167587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.4	2.3e-18	66	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk F + ks+ k+ +g r++vC +eg+r+e+ + ++++r+ ++ trtgC a+++vk + + k++vt++ eHnH+la XP_027167587.1 66 EFYNLYAKLSRFGIHKSNAKQD-ADGISRFRKWVCCCEGYRNEKWFNyEDRKREAKPITRTGCGACFRVKYDIeSVKYVVTRFIMEHNHPLA 156 6************9987766.9999999*********988867889999************98899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MGMDGCDRLR SFDLNQEPEC DRDTFIEENG GSIGGHEDEE ADELVGAIGV DDVMKLTFDT 60 EEEVREFYNL YAKLSRFGIH KSNAKQDADG ISRFRKWVCC CEGYRNEKWF NYEDRKREAK 120 PITRTGCGAC FRVKYDIESV KYVVTRFIME HNHPLASEAR SVNRMDEERR KNIFNGDAEW 180 ALGFLAAKKD VDDMFFYKYH VDNEGRLARL FWADSKSCAD FSIFGDVLVF DTTYKTNKYH 240 KPLVVLAGVD NHLNSTIFCR ALLSDERIET YEWVLNTFVE AMKGRKPVAV MTDGDSAMRR 300 AIKNLLPDAC HRLCSWHLHR NARSNIRCEE FNNRLYNLMA RKCSTLEFEN RWVRLVNECG 360 VVENEWVKKL YRRKRLWAEA YLRGHFFAGM RSTQRCEKMN ALLNEYLNEK MRLYEFVRSF 420 DLAIAWLRHT ESKAVHKSEN TKPVLTTILS ELEGSAAEMF TRNVFFMVRK HLNRQGLLIS 480 EGWSEEGGSR TYYYSKYGGH EISWRVDYDR SMEKLICSCM KFESKGIPCA HMFRVMVVEG 540 MNRIPEACIS KRWTKGVYCT NNGMKAFVAD EQLTQMA

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MGMDGCDRLR SFDLNQEPEC DRDTFIEENG GSIGGHEDEE ADELVGAIGV DDVMKLTFDT  60
EEEVREFYNL YAKLSRFGIH KSNAKQDADG ISRFRKWVCC CEGYRNEKWF NYEDRKREAK  120
PITRTGCGAC FRVKYDIESV KYVVTRFIME HNHPLASEAR SVNRMDEERR KNIFNGDAEW  180
ALGFLAAKKD VDDMFFYKYH VDNEGRLARL FWADSKSCAD FSIFGDVLVF DTTYKTNKYH  240
KPLVVLAGVD NHLNSTIFCR ALLSDERIET YEWVLNTFVE AMKGRKPVAV MTDGDSAMRR  300
AIKNLLPDAC HRLCSWHLHR NARSNIRCEE FNNRLYNLMA RKCSTLEFEN RWVRLVNECG  360
VVENEWVKKL YRRKRLWAEA YLRGHFFAGM RSTQRCEKMN ALLNEYLNEK MRLYEFVRSF  420
DLAIAWLRHT ESKAVHKSEN TKPVLTTILS ELEGSAAEMF TRNVFFMVRK HLNRQGLLIS  480
EGWSEEGGSR TYYYSKYGGH EISWRVDYDR SMEKLICSCM KFESKGIPCA HMFRVMVVEG  540
MNRIPEACIS KRWTKGVYCT NNGMKAFVAD EQLTQMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-77	FAR1 family protein