PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027167254.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 836aa MW: 92313.7 Da PI: 4.4728

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027167254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.9	1.4e-16	32	123	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkvl+ d ++ + l lp+kfa++ ++ + ++ +led++g +W v+l+ k+s +++GW eF +++L++gDf++F +++ + f vv XP_027167254.1 32 FFKVLVG-DDFS-QFLLLPRKFADTVMYLAN--QETKLEDSNGVQWIVTLSLVKNS--LAFSRGWPEFSLDHNLQAGDFLLFNYIKGTHF--VVY 118 7777733.4444.459*****99977744..489**********666666..789*******************987777..* PP EE-SS CS B3 96 vfrks 100 +f+ks XP_027167254.1 119 IFDKS 123 **985 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
MVVMAGACEE CIRNCQLTHR NKMDLSPSVT RFFKVLVGDD FSQFLLLPRK FADTVMYLAN 60 QETKLEDSNG VQWIVTLSLV KNSLAFSRGW PEFSLDHNLQ AGDFLLFNYI KGTHFVVYIF 120 DKSCCERASD KIGLPRKRAR TRGSISSGGK PCEKIDTNPI NRQNSSTSGV SGSNSKNSHI 180 LPTTTNSTLN AEGGNGNWSF LDSSFDMMID WDAGPGPGER RMCLYDLSEF ELQGDKEVAD 240 TDKGIDAVQS TSGHTQTSMR SQDEADKDPT GTKVGTKDLK IATFTEETDM GMMVNEKDLE 300 AKDDMLLERD TDKGIDAVQG TSDHTQTSLR CQNGADKDPT GPEDLKLATF TEENDIGVMV 360 NDDDLKPEDG VLLKCDTDKG IDAVQGSSGH SQTSLRCQDG ADKDPTGAED LKIATITEEA 420 DIGMMVNVNN LEAEDDMLSE RDSDRGINAV QGTSDHGIGM MVNYDELKPE DGMLLKCDTD 480 KGIDAVQGPS DHSQTSLRCQ DGADKDPPGT EDLKIATFTE ETDIGMMVND NSLEAKDGML 540 SEHDSNRGIN AVQGTSDHRE VSLRCQDGAD KDPTRSKDLE TATFTEETDI GMLVNDYNLG 600 GKDDILLECE KVPLADRSNS LPTVLCPELG EKGGNMSNVY IQLQNAERSN KKYDVDWSSP 660 YADEGACFRD SQEEFAGETK KMVRKEHPDT REEGDSSAKR LRGLKPLSVK EIGSSSQGPC 720 ACKPVKLEPV DLLDIPSSVA ESLTCLAMMD GRPYLELPSK LPGITYRKGM DRKSVLLQDQ 780 EKRFWPALYY YRSGFHVLTG CWDKFNKEHR IQAGDHYIFQ AEHVYRGIYK VSVLHQ

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

MVVMAGACEE CIRNCQLTHR NKMDLSPSVT RFFKVLVGDD FSQFLLLPRK FADTVMYLAN  60
QETKLEDSNG VQWIVTLSLV KNSLAFSRGW PEFSLDHNLQ AGDFLLFNYI KGTHFVVYIF  120
DKSCCERASD KIGLPRKRAR TRGSISSGGK PCEKIDTNPI NRQNSSTSGV SGSNSKNSHI  180
LPTTTNSTLN AEGGNGNWSF LDSSFDMMID WDAGPGPGER RMCLYDLSEF ELQGDKEVAD  240
TDKGIDAVQS TSGHTQTSMR SQDEADKDPT GTKVGTKDLK IATFTEETDM GMMVNEKDLE  300
AKDDMLLERD TDKGIDAVQG TSDHTQTSLR CQNGADKDPT GPEDLKLATF TEENDIGVMV  360
NDDDLKPEDG VLLKCDTDKG IDAVQGSSGH SQTSLRCQDG ADKDPTGAED LKIATITEEA  420
DIGMMVNVNN LEAEDDMLSE RDSDRGINAV QGTSDHGIGM MVNYDELKPE DGMLLKCDTD  480
KGIDAVQGPS DHSQTSLRCQ DGADKDPPGT EDLKIATFTE ETDIGMMVND NSLEAKDGML  540
SEHDSNRGIN AVQGTSDHRE VSLRCQDGAD KDPTRSKDLE TATFTEETDI GMLVNDYNLG  600
GKDDILLECE KVPLADRSNS LPTVLCPELG EKGGNMSNVY IQLQNAERSN KKYDVDWSSP  660
YADEGACFRD SQEEFAGETK KMVRKEHPDT REEGDSSAKR LRGLKPLSVK EIGSSSQGPC  720
ACKPVKLEPV DLLDIPSSVA ESLTCLAMMD GRPYLELPSK LPGITYRKGM DRKSVLLQDQ  780
EKRFWPALYY YRSGFHVLTG CWDKFNKEHR IQAGDHYIFQ AEHVYRGIYK VSVLHQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	141	PRKRART

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	3e-11	B3 family protein