PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027167019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 209aa MW: 22755.2 Da PI: 8.0371 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.6 | 9.5e-05 | 57 | 79 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H XP_027167019.1 57 FECQYCHRQFANSQALGGHQNAH 79 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MAESSNQSSS ASTADPTEAL DLSLTASPSV VKLFGFPVTQ WGRSALGAHQ NADSKRFECQ 60 YCHRQFANSQ ALGGHQNAHK KERQRLKRVQ FMNDQYLPKF GDASASHDTM INQHAARSGP 120 FLYSTAPPCA TSIGPYIGPH LGSSAAHQYS FAHPPQVLSG IPIRYPCATN YVGRSEQAEV 180 NHLQRATVRS SKSSSVSEIN DEVDVDLHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 1e-12 | C2H2 family protein |