PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027167008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | CPP | ||||||||
Protein Properties | Length: 800aa MW: 87206.8 Da PI: 6.1531 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 50.1 | 5.5e-16 | 505 | 542 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk XP_027167008.1 505 CKRCNCKKSKCLKLYCECFAAGVYCVEPCSCQECFNKP 542 89**********************************96 PP | |||||||
2 | TCR | 51.1 | 2.7e-16 | 587 | 625 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN XP_027167008.1 587 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 625 589***********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 800 aa Download sequence |
MGEEGERKEI EEVGKKKEVV VMDTPERSKN QINTPISKFE ESPVFSFLNN LSPIQPVKSV 60 HITQTLNALS FASLPSVFTS PHASSLKESR FLRRHQLVDP SRPEFSSDSQ KKIDGNGGIV 120 KYAHNSSEQQ ENFDPGNSLG ETSIEPSYDC SQLAVEFVRS LNYDCKSPIS SPKASCAASN 180 KGLSEFDANA GPLVPFSLVV SGKGLFTNES SIEGLGQTNQ SRDGAGCDWE SLISDAADLL 240 NFDTPKDVDS FNESPRSTTA FHTNNTNNIQ NMQTFGCIEH QGEGIDNENP STQPGEGSCV 300 MEFAEPEEVI TSSSLNSECV EGSLSQKMDA EPVSNLYRGM RRRCLVFEMA GARRKHLEEN 360 SSSVSSILLQ SDGNTPSADK QLVPFKSGND SSRCILPGIG LHLNALATTP KEFKVVKQDA 420 SVAGRLVIAP SSTANFQPIM AGQESFNESL ALTSTETDMD PIENAAPLTE DANQLSALIA 480 NEEFNQISPK KKRRRLEVSG EPEGCKRCNC KKSKCLKLYC ECFAAGVYCV EPCSCQECFN 540 KPIHEDTVLA TRKQIESRNP LAFAPKVIRS SDSLTEDDSS KTPASARHKR GCNCKKSGCL 600 KKYCECYQGG VGCSINCRCE GCKNAFGRKD GSIYIGTEAE LEEDETDALE KTVKDRKPHK 660 TAIQVDVEQQ NPESAPPATP LRFGRPSVQL PFSSKKKPPR SSLPSIGSSS GLYPIQGLAK 720 PNLLHPQPKF DKHFQTVQED ELPEILQGNG SPIGGIKLAS PNSKRVSPPH CDFEMSPGRR 780 SSRKLILQSI PAFPSLTPKH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 489 | 496 | PKKKRRRL |
2 | 490 | 495 | KKKRRR |
3 | 492 | 496 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14770.1 | 1e-155 | CPP family protein |