PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027166109.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 621aa MW: 71876.1 Da PI: 7.9145

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027166109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.7	9.3e-24	21	108	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+ vGFsvrk++ +k ++g +t+r+++C keg++ + + + +k +rtraet+tgC+ak+ + +++ + k++v +l+ eHnH+l XP_027166109.1 21 NFYNRYGLVVGFSVRKDYLNKD-KDGVVTSRRYTCCKEGFKPQYEGD-VKPKRTRAETKTGCEAKMGIILNReTMKYQVRDLVIEHNHTL 108 6***************9998.8999**********999999.9***************999989************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEGFK 60 PQYEGDVKPK RTRAETKTGC EAKMGIILNR ETMKYQVRDL VIEHNHTLHI SEYAHMMRSQ 120 RKVSISQGAQ AEIANDAGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG 180 ETGAMLRYFE EQKLENPSFF HAEQLDCEEQ ITNIFWADAS MLMDYTYFGD VITFDTTYKT 240 NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFG TFVEAVCGRH PKTIFTDQDA 300 AMAAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFGECMYE IEDENEFIMA 360 WDAMLKEHKL ETNEWLCGIY ACRKKWAKCF MKGAWTAGMR STQLSESLNA SIKHYLKLDH 420 NLVEFFKHFD RVVDEKRYNE LKAEYHSRQK LPMLGLQQTP VLIQAACIYS SCMFVAFQNE 480 YDESTTMVIL DQKHTIMHVE YSVSHYDGGR ARRLILNPIT KDITCSCNLF EQEGILYSHA 540 LKVYDMVGTK FIPDQYVTKR WTKKARSGAS VDCKGREISS DPSLSISHRY RLLAPEMVRL 600 ATRAAMSEAA TKFEETKRQK N

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEGFK  60
PQYEGDVKPK RTRAETKTGC EAKMGIILNR ETMKYQVRDL VIEHNHTLHI SEYAHMMRSQ  120
RKVSISQGAQ AEIANDAGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG  180
ETGAMLRYFE EQKLENPSFF HAEQLDCEEQ ITNIFWADAS MLMDYTYFGD VITFDTTYKT  240
NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFG TFVEAVCGRH PKTIFTDQDA  300
AMAAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFGECMYE IEDENEFIMA  360
WDAMLKEHKL ETNEWLCGIY ACRKKWAKCF MKGAWTAGMR STQLSESLNA SIKHYLKLDH  420
NLVEFFKHFD RVVDEKRYNE LKAEYHSRQK LPMLGLQQTP VLIQAACIYS SCMFVAFQNE  480
YDESTTMVIL DQKHTIMHVE YSVSHYDGGR ARRLILNPIT KDITCSCNLF EQEGILYSHA  540
LKVYDMVGTK FIPDQYVTKR WTKKARSGAS VDCKGREISS DPSLSISHRY RLLAPEMVRL  600
ATRAAMSEAA TKFEETKRQK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein